About

Translating omics data into decisions

Ahmed Mokhtar Ramzy Salem
Bioinformatican · Educator
Available for new collaborations

Bioinformatics scientist with a biotechnology background, focused on cancer genomics and transcriptomics. MSc candidate at Cairo University, postgraduate-diploma trained at Suez Canal University. Six-plus years teaching bioinformatics — from NGS foundations to single-cell and spatial transcriptomics — and shipping reproducible analysis pipelines for independent research.

Single-Cell RNA-seq
Spatial Transcriptomics
Cancer Genomics
TCR Repertoire
Bulk RNA-Seq / DESeq2
Multi-Omics Integration
ML in Genomics
Reproducible Pipelines
Teaching & Mentorship
Education

A multi-disciplinary trajectory

From wet-lab biotechnology to genomics, statistics, and business — a deliberate stack built across six programs.

  1. milestone · 01

    MBA · Marketing

    AAMBFS
    Business Strategy
  2. milestone · 02in progress

    MSc Candidate · Genetics & Bioinformatics

    Faculty of Agriculture · Cairo University
    Genetics Department
  3. milestone · 03in progress

    MicroMasters · Statistics & Data Science

    MITx
    Computational Statistics
  4. milestone · 04

    Postgraduate Diploma · Bioinformatics

    Suez Canal University
    Systems Biology · NGS
  5. milestone · 05

    Diploma · Data Analysis

    Arab Academy for Science, Technology & Maritime Transport
    Analytics
  6. milestone · 06

    Diploma · Data Science

    Epsilon Institute
    ML · Python

From counts to cell atlases

A glimpse of a single-cell UMAP: hover a cluster to isolate it. Real projects scale to hundreds of thousands of cells with the same pipeline.

umap_2d · n = 224
PBMC · demo
Clusters
pipeline
fastq → STARsolo → Seurat →
umap → annotate → export