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Freelancing

Bioinformatics freelancing, done right.

Hire me for project work across NGS, variant calling, RNA-seq, single-cell, pipelines, and ML — or learn the exact playbook to start freelancing in bioinformatics yourself.

Services I offer

Metagenomics

16S rRNA-seq, shotgun metagenomics, and metatranscriptomics — from raw reads to taxonomic profiles, functional pathways, and differential abundance.

QIIME2MothurKraken2HUMAnNMetaPhlAnShotgunMetatranscriptomics

Genomics

Whole-genome and whole-exome analysis: QC, alignment, germline & somatic variant calling, CNV/SV, and clinical-grade annotation.

WGSWESGATKDeepVariantVEPClinVar

Transcriptomics

Bulk RNA-seq, single-cell, spatial transcriptomics, splicing, fusion detection, and gene co-expression network analysis (WGCNA).

Bulk RNAscRNA-seqSpatialSplicingWGCNADESeq2SeuratScanpy

Epigenomics

DNA methylation (WGBS/RRBS/EPIC arrays), histone modifications (ChIP-seq/CUT&RUN), and chromatin accessibility (ATAC-seq/DNase-seq).

WGBSEPICChIP-seqCUT&RUNATAC-seqDiffBind

Immunogenetics

TCR and BCR repertoire profiling from bulk and single-cell data — clonotype analysis, diversity metrics, and clonal tracking.

TCRBCRMiXCRscTCRscBCRImmcantation

Metabolomics Data Analysis

Targeted and untargeted metabolomics: preprocessing, normalization, statistical analysis, pathway enrichment, and biomarker discovery.

XCMSMetaboAnalystMS-DIALKEGGPathway analysis

Machine Learning

Classical ML for omics: classification, regression, feature selection, and dimensionality reduction with rigorous cross-validation.

XGBoostSVMPLSRFKNNLightGBMGraph-basedPCAt-SNEUMAP

Deep Learning

Deep models for sequence, image, and graph-structured biomedical data, with transfer learning and explainability.

CNNsRNNsGANsTransformersVAEGNNsPyTorch

Pipeline Development

Production-grade reproducible pipelines with containers, schedulers, CI/CD, and monitoring for HPC and cloud.

NextflowDockerSingularityCWLSLURMGitHub ActionsGitLab CIKubernetesPrometheus + Grafana

Consulting & Review

Experimental design, methods sections, manuscript figures, code review, and reproducibility audits.

Study designStatsFiguresPeer review prep

Packages & pricing

Micro Task

$50 – $150
24–72h
  • Single dataset Q&A
  • Quick script or plot
  • Async over email

Project

$500 – $3,000
1–4 weeks
  • Full analysis + report
  • Reproducible code
  • 2 revision rounds
  • Kickoff & wrap calls

Retainer

From $1,500 / mo
Ongoing
  • Dedicated hours
  • Pipeline maintenance
  • Weekly sync
  • Priority response

Pricing is indicative. Final quote depends on data size, complexity, and turnaround.

How it works

  1. 1

    Brief

    You send the form below with goals, data, and timeline.

  2. 2

    Scope call

    30-min free call to align on deliverables and price.

  3. 3

    Proposal

    Fixed-scope quote, milestones, and NDA if needed.

  4. 4

    Delivery

    Code, results, and a clear report. Revisions included.

Send a project brief

The more detail you share, the faster I can quote. I reply within 48 hours.

Prefer email? Use the contact page.

Start your freelancing career in bioinformatics

A 12-week, project-based program that takes you from "I know some bioinformatics" to landing your first paid clients. Designed for students, postdocs, and early-career scientists.

12 weeks
~6 hrs / week
Small cohort
Live reviews + 1:1 office hours
Portfolio + first client
Ship 3 case studies, run 1 mock engagement

Module 1 — Foundations

  • Linux, shell, and Git for bioinformatics
  • Python & R essentials for data science
  • Genomics primer: DNA, RNA, sequencing tech

Module 2 — Core Analyses

  • NGS QC, alignment, and variant calling
  • RNA-seq differential expression
  • Single-cell from raw counts to annotation

Module 3 — Engineering

  • Reproducibility with Docker & Conda
  • Workflow managers (Nextflow / Snakemake)
  • Cloud basics (AWS S3, batch compute)

Module 4 — Freelance Business

  • Positioning & finding your niche
  • Pricing, scoping, and writing proposals
  • Contracts, NDAs, invoicing, and taxes (intro)
  • Building a portfolio that converts

Module 5 — Getting Clients

  • Upwork, Kolabtree, Fiverr Pro playbooks
  • Cold outreach to academic labs & biotech
  • LinkedIn presence & content engine
  • Turning one client into three referrals

Module 6 — Capstone

  • Ship a public end-to-end bioinformatics project
  • Mock client engagement with feedback
  • Portfolio + pricing review

Interested in the next cohort? Apply through the form above and pick "Other / Not sure" as the project type — mention "Freelancing program" in your goals.

Or explore 1:1 mentoring